Package: alignprimer Version: 1.0-1 Architecture: i386 Maintainer: Gerald Weber Installed-Size: 363 Depends: libboost-regex1.54.0, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.6), zlib1g (>= 1:1.1.4) Filename: ./i386/alignprimer_1.0-1_i386.deb Size: 106454 MD5sum: 315642dddae9d8eafa071aa6a0e36bbd SHA1: 07963280d2d0903612c3ff79508d525a1d22ee5b SHA256: 8ec3d9481570a99ba7bf852fae691d4d816cc5ddc38a4c5efff1ed7007c35f4b Section: Physics Priority: extra Homepage: Description: Dynamic programming alignment of PCR primers to genomes Package: alignprimer Version: 1.0-1 Architecture: amd64 Maintainer: Gerald Weber Installed-Size: 368 Depends: libboost-regex1.54.0, libc6 (>= 2.14), libgcc1 (>= 1:4.1.1), libstdc++6 (>= 4.6), zlib1g (>= 1:1.1.4) Filename: ./amd64/alignprimer_1.0-1_amd64.deb Size: 106910 MD5sum: a9d4a1c78ee07cc4a9761e2544b28099 SHA1: 450d25d12071909911939519d7e63cc36a4305c7 SHA256: 06d21315b451b891435940f2c5564ecec953fb1185873c8eaa23979a4438e762 Section: Physics Priority: extra Homepage: Description: Dynamic programming alignment of PCR primers to genomes Package: tfreg Version: 5.2-1 Architecture: i386 Maintainer: Gerald Weber Installed-Size: 18649 Depends: libboost-filesystem1.54.0, libboost-regex1.54.0, libboost-system1.54.0, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libgsl0ldbl (>= 1.9), liblapack3 | liblapack.so.3, libstdc++6 (>= 4.4.0) Filename: ./i386/tfreg_5.2-1_i386.deb Size: 6253408 MD5sum: 196fb359d0eff8152e1af1e6a338d94b SHA1: aef68f5ef9190929b5a650e0a4eefc4a3dca78ed SHA256: 232d20d7e528e55e06a37b190d5d627db10f564321bf2764b8a2e4f3e8da7119 Section: Physics Priority: extra Homepage: Description: TfReg implements the calculation of Peyrard-Bishop style Hamiltonians to obtain some physical properties of DNA and RNA duplexes. The method uses the transfer matrix technique for the calculation of the classical partition function. Also, TfReg calculates the regression of experimental versus predicted melting temperatures using the equivalent melting index. Package: tfreg Version: 5.2-1 Architecture: amd64 Maintainer: Gerald Weber Installed-Size: 18679 Depends: libboost-filesystem1.54.0, libboost-regex1.54.0, libboost-system1.54.0, libc6 (>= 2.14), libgcc1 (>= 1:4.1.1), libgsl0ldbl (>= 1.9), liblapack3 | liblapack.so.3, libstdc++6 (>= 4.4.0) Filename: ./amd64/tfreg_5.2-1_amd64.deb Size: 6276008 MD5sum: b6c28de825a2b5a81f5f94a5e4b114eb SHA1: f79bb738d48ce6e6539871b64d77f4eae25f9aab SHA256: e58a956afaffe211dbca182bdadde2d8cabd282812c092f447958371ad5b6eb0 Section: Physics Priority: extra Homepage: Description: TfReg implements the calculation of Peyrard-Bishop style Hamiltonians to obtain some physical properties of DNA and RNA duplexes. The method uses the transfer matrix technique for the calculation of the classical partition function. Also, TfReg calculates the regression of experimental versus predicted melting temperatures using the equivalent melting index. Package: vargibbs Version: 3.0-1 Architecture: i386 Maintainer: Gerald Weber Installed-Size: 143616 Depends: libboost-filesystem1.54.0, libboost-iostreams1.54.0, libboost-regex1.54.0, libboost-system1.54.0, libc6 (>= 2.4), libgcc1 (>= 1:4.1.1), libgsl0ldbl (>= 1.9), libstdc++6 (>= 4.6) Filename: ./i386/vargibbs_3.0-1_i386.deb Size: 7432508 MD5sum: 554ed6fd0abb7aa2bfa4067042e8cb80 SHA1: 7bee06b745d6f05d7a308e55008a2ffca61d3a9b SHA256: fa7a39a66bb28bd42bc0c5113ee6e7a6b99c015f9cfadd938e73fe9773facd5e Section: Physics Priority: extra Homepage: Description: Minimization method for calculating DNA nearest-neighbour thermodynamic parameters Package: vargibbs Version: 3.0-1 Architecture: amd64 Maintainer: Gerald Weber Installed-Size: 143642 Depends: libboost-filesystem1.54.0, libboost-iostreams1.54.0, libboost-regex1.54.0, libboost-system1.54.0, libc6 (>= 2.14), libgcc1 (>= 1:4.1.1), libgsl0ldbl (>= 1.9), libstdc++6 (>= 4.6) Filename: ./amd64/vargibbs_3.0-1_amd64.deb Size: 7428882 MD5sum: 1789c250ad26fda0bea03d5e56376c23 SHA1: 3e6c3643614c170f58c2d98b4ab1657c7d12384d SHA256: 32f635e91c9285bfb06a1db22277ef475054723a0db2d2ce7329fff6cb5089de Section: Physics Priority: extra Homepage: Description: Minimization method for calculating DNA nearest-neighbour thermodynamic parameters